Basic Information
Locus ID:
gene-LOC132614440
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Lipid transfer protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 118802971 | 118803652 | - | gene-LOC132614440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 17,538.00 Da | 43.38 | 95.72 | 0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01958 | HPS_like | 80 | 164 | 5.79675E-26 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 81 | 165 | 6.1E-24 | IPR027923 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 84 | 165 | 1.36E-24 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 81 | 166 | 4.3E-29 | IPR036312 |
| SMART | SM00499 | aai_6 | 82 | 164 | 3.6E-7 | IPR016140 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12480.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. a putative lipid transfer protein, vernalization-responsive and cold-induced | 0 |
| RefSeq | XP_049377500.1 | 14 kDa proline-rich protein DC2.15-like [Solanum stenotomum] | 0 |
| Q39176 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XKV2 | PEARLI1-like lipid transfer protein 2 OS=Capsicum baccatum OX=33114 GN=CQW23_00478 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 9 | gene-LOC132613391, gene-LOC132614327, gene-LOC132614440 ... |