Basic Information
Locus ID:
gene-LOC132614149
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Hippocampus abundant
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11939258 | 11944361 | - | gene-LOC132614149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 48,308.74 Da | 39.08 | 115.78 | 0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 15 | 417 | 1.0078E-55 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 59 | 377 | 1.7E-20 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 58 | 424 | 3.66E-33 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 49 | 419 | 2.7E-32 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 423 | 9.038 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 73 | 89 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_009773274.1 | PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Nicotiana sylvestris] | 0 |
| TrEMBL | A0A1S4CUE8 | hippocampus abundant transcript-like protein 1 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107822693 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology