Basic Information
Locus ID:
gene-LOC132614133
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 3463110 | 3466760 | + | gene-LOC132614133 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 69,350.44 Da | 30.09 | 99.42 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 356 | 619 | 2.84173E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 354 | 613 | 1.1E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 172 | 4.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 59 | 2.2E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 615 | 5.88E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 205 | 4.42E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 424 | 7.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 133 | 6.1E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 134 | 214 | 2.8E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 633 | 2.3E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 619 | 32.527294 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 356 | 378 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_049372230.1 | probable inactive receptor kinase At1g48480 [Solanum verrucosum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | S4WG09 | Ovary receptor kinase 11 OS=Solanum chacoense OX=4108 GN=ORK11 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology