Basic Information
Locus ID:
gene-LOC132613877
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 41802030 | 41808918 | - | gene-LOC132613877 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.43 | 185,921.59 Da | 46.50 | 70.95 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 1119 | 1205 | 6.4652E-30 | - |
| Pfam | PF00855 | PWWP domain | 1119 | 1205 | 3.1E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 1118 | 1235 | 3.91E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 1113 | 1212 | 3.0E-23 | - |
| SMART | SM00293 | PWWP_4 | 1119 | 1180 | 1.7E-8 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 1121 | 1182 | 14.272547 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1559 | 1612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1060 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1060 | 1092 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1508 | 1528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 935 | 955 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1576 | 1598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1373 | 1396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1348 | 1363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1323 | 1401 | - | - |
| Coils | Coil | Coil | 430 | 450 | - | - |
| Coils | Coil | Coil | 358 | 378 | - | - |
| Coils | Coil | Coil | 394 | 414 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_049373367.1 | uncharacterized protein LOC125838348 [Solanum verrucosum] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | M1APN1 | PWWP domain-containing protein OS=Solanum tuberosum OX=4113 GN=102601545 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology