Basic Information
Locus ID:
gene-LOC132613726
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 89241996 | 89248347 | - | gene-LOC132613726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 69,300.52 Da | 35.76 | 97.28 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 5.6E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 303 | 573 | 1.0E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 1.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 192 | 1.99E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 576 | 3.83E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 594 | 1.0E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 378 | 4.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 213 | 1.5E-53 | IPR032675 |
| SMART | SM00220 | serkin_6 | 302 | 575 | 3.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 585 | 36.145599 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_009800027.1 | PREDICTED: protein NSP-INTERACTING KINASE 3 [Nicotiana sylvestris] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4CJ91 | protein NSP-INTERACTING KINASE 3-like OS=Nicotiana tabacum OX=4097 GN=LOC107819478 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology