halophFGD

Basic Information

Locus ID: gene-LOC132613494

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Serine-threonine protein kinase, plant-type

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	124635801	124640318	-	gene-LOC132613494

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.05	124,383.71 Da	39.00	110.58	0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00560	Leucine Rich Repeat	166	185	0.064	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	25	64	3.4E-8	IPR013210
Pfam	PF00069	Protein kinase domain	850	1117	2.5E-45	IPR000719
Pfam	PF13855	Leucine rich repeat	680	739	7.1E-7	IPR001611
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	824	1120	5.66E-73	IPR011009
SUPERFAMILY	SSF52047	RNI-like	405	746	1.49E-57	-
SUPERFAMILY	SSF52047	RNI-like	73	397	5.49E-53	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	160	257	6.2E-22	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	23	159	7.8E-34	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	258	473	3.0E-55	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	474	781	6.5E-87	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	922	1128	9.1E-61	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	816	921	1.2E-22	-
SMART	SM00365	LRR_sd22_2	115	147	780.0	-
SMART	SM00365	LRR_sd22_2	406	432	400.0	-
SMART	SM00365	LRR_sd22_2	606	627	120.0	-
SMART	SM00365	LRR_sd22_2	260	286	190.0	-
SMART	SM00365	LRR_sd22_2	558	584	250.0	-
SMART	SM00365	LRR_sd22_2	308	334	13.0	-
SMART	SM00365	LRR_sd22_2	702	728	36.0	-
SMART	SM00369	LRR_typ_2	260	284	45.0	IPR003591
SMART	SM00365	LRR_sd22_2	211	237	290.0	-
SMART	SM00369	LRR_typ_2	606	630	29.0	IPR003591
SMART	SM00369	LRR_typ_2	558	582	52.0	IPR003591
SMART	SM00369	LRR_typ_2	211	234	250.0	IPR003591
SMART	SM00220	serkin_6	846	1123	1.0E-35	IPR000719
SMART	SM00369	LRR_typ_2	678	701	39.0	IPR003591
SMART	SM00369	LRR_typ_2	163	187	32.0	IPR003591
SMART	SM00369	LRR_typ_2	115	139	0.15	IPR003591
SMART	SM00369	LRR_typ_2	702	726	57.0	IPR003591
SMART	SM00369	LRR_typ_2	406	430	23.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	846	1127	36.428276	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	965	977	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	852	874	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47580.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_015165798.1	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum]
Swiss-Prot	Q1MX30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1
TrEMBL	M1A662	Protein kinase domain-containing protein OS=Solanum tuberosum OX=4113 GN=107061290 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	10	gene-LOC132613285, gene-LOC132613458, gene-LOC132613462 ... gene-LOC132613463, gene-LOC132613494, gene-LOC132614590, gene-LOC132616014, gene-LOC132616880, gene-LOC132620071, gene-LOC132624955
Solanaceae	Solanum chilense	1	SOLCI004842000
Solanaceae	Solanum pennellii	2	gene-LOC107016360, gene-LOC107024787