halophFGD

Basic Information

Locus ID: gene-LOC132613463

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Serine-threonine protein kinase, plant-type

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	124743582	124747104	-	gene-LOC132613463

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.14	125,898.09 Da	38.84	107.85	0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	854	1121	2.4E-44	IPR000719
Pfam	PF08263	Leucine rich repeat N-terminal domain	28	67	2.6E-8	IPR013210
Pfam	PF00560	Leucine Rich Repeat	169	188	0.06	IPR001611
Pfam	PF13855	Leucine rich repeat	683	742	7.2E-7	IPR001611
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	826	1123	5.47E-71	IPR011009
SUPERFAMILY	SSF52047	RNI-like	408	758	7.3E-61	-
SUPERFAMILY	SSF52075	Outer arm dynein light chain 1	74	208	3.01E-19	-
SUPERFAMILY	SSF52047	RNI-like	166	502	1.73E-55	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	810	925	4.1E-23	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	483	778	1.7E-85	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	353	406	1.5E-9	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	28	142	8.7E-32	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	259	352	3.2E-24	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	926	1131	9.3E-58	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	407	482	2.8E-15	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	143	258	1.3E-24	IPR032675
SMART	SM00369	LRR_typ_2	609	633	64.0	IPR003591
SMART	SM00369	LRR_typ_2	681	704	84.0	IPR003591
SMART	SM00369	LRR_typ_2	705	729	190.0	IPR003591
SMART	SM00369	LRR_typ_2	118	142	3.8	IPR003591
SMART	SM00369	LRR_typ_2	359	384	260.0	IPR003591
SMART	SM00369	LRR_typ_2	263	287	220.0	IPR003591
SMART	SM00369	LRR_typ_2	214	238	94.0	IPR003591
SMART	SM00220	serkin_6	850	1130	8.9E-29	IPR000719
SMART	SM00369	LRR_typ_2	537	561	380.0	IPR003591
SMART	SM00369	LRR_typ_2	457	481	390.0	IPR003591
SMART	SM00369	LRR_typ_2	585	608	60.0	IPR003591
SMART	SM00369	LRR_typ_2	166	190	42.0	IPR003591
SMART	SM00369	LRR_typ_2	409	433	43.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	850	1131	35.043144	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	856	878	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	969	981	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47580.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_015165798.1	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum]
Swiss-Prot	Q1MX30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1
TrEMBL	M1A662	Protein kinase domain-containing protein OS=Solanum tuberosum OX=4113 GN=107061290 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	10	gene-LOC132613285, gene-LOC132613458, gene-LOC132613462 ... gene-LOC132613463, gene-LOC132613494, gene-LOC132614590, gene-LOC132616014, gene-LOC132616880, gene-LOC132620071, gene-LOC132624955
Solanaceae	Solanum chilense	1	SOLCI004842000
Solanaceae	Solanum pennellii	2	gene-LOC107016360, gene-LOC107024787