HalophFGD

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Basic Information
Locus ID: gene-LOC132613458
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: Serine-threonine protein kinase, plant-type
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 124471796 124475369 + gene-LOC132613458
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.40 126,100.39 Da 38.39 108.99 0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08263 Leucine rich repeat N-terminal domain 28 67 1.2E-9 IPR013210
Pfam PF00069 Protein kinase domain 854 1121 4.2E-40 IPR000719
Pfam PF13855 Leucine rich repeat 410 470 4.0E-7 IPR001611
Pfam PF00560 Leucine Rich Repeat 491 512 1.5 IPR001611
Pfam PF00560 Leucine Rich Repeat 683 704 0.075 IPR001611
SUPERFAMILY SSF52047 RNI-like 408 745 1.26E-57 -
SUPERFAMILY SSF52047 RNI-like 76 399 1.33E-55 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 826 1123 7.52E-66 IPR011009
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 478 785 4.5E-81 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 141 213 4.9E-15 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 29 140 7.4E-32 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 820 925 1.0E-21 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 926 1132 1.2E-53 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 217 405 1.1E-46 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 406 477 1.1E-15 IPR032675
SMART SM00369 LRR_typ_2 384 408 310.0 IPR003591
SMART SM00220 serkin_6 850 1130 8.6E-18 IPR000719
SMART SM00365 LRR_sd22_2 214 240 37.0 -
SMART SM00369 LRR_typ_2 118 142 4.2 IPR003591
SMART SM00369 LRR_typ_2 409 433 190.0 IPR003591
SMART SM00369 LRR_typ_2 166 190 43.0 IPR003591
SMART SM00369 LRR_typ_2 681 704 43.0 IPR003591
SMART SM00369 LRR_typ_2 214 238 5.7 IPR003591
SMART SM00369 LRR_typ_2 561 585 52.0 IPR003591
SMART SM00369 LRR_typ_2 263 287 130.0 IPR003591
SMART SM00369 LRR_typ_2 609 633 110.0 IPR003591
SMART SM00365 LRR_sd22_2 359 386 490.0 -
SMART SM00365 LRR_sd22_2 311 337 64.0 -
SMART SM00365 LRR_sd22_2 681 702 210.0 -
SMART SM00365 LRR_sd22_2 585 611 200.0 -
SMART SM00365 LRR_sd22_2 433 459 370.0 -
ProSiteProfiles PS51450 Leucine-rich repeat profile. 683 704 7.696554 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 850 1131 31.707521 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 969 981 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 856 878 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47580.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_016572085.2 receptor kinase-like protein Xa21 [Capsicum annuum] 0
Swiss-Prot Q1MX30 Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 0
TrEMBL A0A1U8GTG3 probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107870155 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 10 gene-LOC132613285, gene-LOC132613458, gene-LOC132613462 ...
gene-LOC132613463, gene-LOC132613494, gene-LOC132614590, gene-LOC132616014, gene-LOC132616880, gene-LOC132620071, gene-LOC132624955
Solanaceae Solanum chilense 1 SOLCI004842000
Solanaceae Solanum pennellii 2 gene-LOC107016360, gene-LOC107024787
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.