Basic Information
Locus ID:
gene-LOC132613343
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 114016718 | 114020032 | + | gene-LOC132613343 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 53,010.28 Da | 49.34 | 63.92 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 249 | 380 | 5.2E-28 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049358708.1 | uncharacterized protein LOC125823367 [Solanum verrucosum] | 0 |
| TrEMBL | O49072 | PttA2 protein OS=Petunia hybrida OX=4102 GN=PttA PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 52 | gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107009182, gene-LOC107016531, gene-LOC114076118 |