HalophFGD

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Basic Information
Locus ID: gene-LOC132613212
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 102225903 102226343 - gene-LOC132613212
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.68 16,683.97 Da 43.09 90.00 0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 21 144 9.7E-15 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_009759382.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X2 [Nicotiana sylvestris] 0
TrEMBL A0A1U7UTJ7 F-box/kelch-repeat protein At3g23880-like isoform X2 OS=Nicotiana sylvestris OX=4096 GN=LOC104211938 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_16616
Amaranthaceae Atriplex hortensis 3 Ah018633, Ah018634, Ah034289
Amaranthaceae Salicornia bigelovii 1 Sbi_jg35729
Amaranthaceae Salicornia europaea 2 Seu_jg3693, Seu_jg3694
Amaranthaceae Suaeda aralocaspica 3 GOSA_00020056, GOSA_00020058, GOSA_00020059
Amaranthaceae Suaeda glauca 24 Sgl01351, Sgl01352, Sgl01353, Sgl01354, Sgl01355, Sgl06434 ...
Sgl06505, Sgl06506, Sgl06507, Sgl06508, Sgl06509, Sgl06510, Sgl14387, Sgl19561, Sgl21479, Sgl23230, Sgl23231, Sgl25655, Sgl25899, Sgl28295, Sgl28296, Sgl30824, Sgl52613, Sgl57906
Amaranthaceae Chenopodium album 4 gene:ENSEOMG00000028850, gene:ENSEOMG00000030685 ...
gene:ENSEOMG00000045698, gene:ENSEOMG00000045710
Amaranthaceae Chenopodium quinoa 9 CQ.Regalona.r1.2BG0014960, CQ.Regalona.r1.3AG0004980 ...
CQ.Regalona.r1.3AG0005000, CQ.Regalona.r1.3AG0005010, CQ.Regalona.r1.3AG0005030, CQ.Regalona.r1.3AG0005040, CQ.Regalona.r1.3BG0005010, CQ.Regalona.r1.3BG0005040, CQ.Regalona.r1.3BG0005050
Plantaginaceae Plantago ovata 1 Pov_00023045
Solanaceae Lycium barbarum 1 gene-LOC132613212
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.