Basic Information
Locus ID:
gene-LOC132612812
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 20038258 | 20058938 | + | gene-LOC132612812 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 47,888.76 Da | 47.22 | 63.36 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 201 | 332 | 2.3E-26 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 101 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049344031.1 | uncharacterized protein LOC125808363 [Solanum verrucosum] | 0 |
| TrEMBL | O49072 | PttA2 protein OS=Petunia hybrida OX=4102 GN=PttA PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 52 | gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107009182, gene-LOC107016531, gene-LOC114076118 |