Basic Information
Locus ID:
gene-LOC132612732
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12475752 | 12476762 | + | gene-LOC132612732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 12,459.16 Da | 37.37 | 62.66 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 18 | 89 | 1.2E-14 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 90 | 1.65E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 3 | 91 | 2.6E-22 | - |
| SMART | SM00213 | ubq_7 | 18 | 90 | 0.0055 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 18 | 94 | 9.329968 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55855.2 | - | 0 |
| RefSeq | XP_016568088.1 | small ubiquitin-related modifier 2 isoform X2 [Capsicum annuum] | 0 |
| Q3E8A8 | Putative small ubiquitin-related modifier 7 OS=Arabidopsis thaliana OX=3702 GN=SUMO7 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G2ZTP7 | Small ubiquitin-related modifier OS=Capsicum annuum OX=4072 GN=LOC107866575 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology