Basic Information
Locus ID:
gene-LOC132612321
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 117172633 | 117174183 | - | gene-LOC132612321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 48,897.73 Da | 35.74 | 75.61 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 97 | 443 | 2.57091E-77 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 295 | 438 | 1.3E-26 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 97 | 271 | 2.3E-53 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 93 | 443 | 1.23E-85 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 270 | 446 | 1.4E-44 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 79 | 269 | 2.7E-50 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 97 | 439 | 41.595085 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 324 | 335 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_009771148.1 | PREDICTED: aspartic proteinase CDR1-like [Nicotiana sylvestris] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7VXN6 | aspartic proteinase CDR1-like OS=Nicotiana sylvestris OX=4096 GN=LOC104221726 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology