halophFGD

Basic Information

Locus ID: gene-LOC132612311

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	123793575	123794143	-	gene-LOC132612311

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.59	17,524.41 Da	54.49	105.06	0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	35	145	7.3E-17	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	33	154	2.53E-32	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	19	106	5.2E-16	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	107	154	2.4E-12	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	31	154	16.61241	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47090.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_049364220.1	probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum verrucosum]
Swiss-Prot	Q1MX30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1
TrEMBL	M0ZKF4	Protein kinase domain-containing protein OS=Solanum tuberosum OX=4113 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for gene-LOC132612311.