halophFGD

Basic Information

Locus ID: gene-LOC132612106

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Plant transposase (Ptta/En/Spm family)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	104341608	104342398	-	gene-LOC132612106

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.73	23,219.73 Da	46.77	67.18	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	61	75	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	85	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	8	47	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_049386102.1	uncharacterized protein LOC125850294 [Solanum stenotomum]	0
TrEMBL	A0A1U7VP13	uncharacterized protein LOC104220461 isoform X2 OS=Nicotiana sylvestris OX=4096 GN=LOC104220461 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	52	gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... gene-LOC132601785, gene-LOC132603577, gene-LOC132607741, gene-LOC132608134, gene-LOC132608151, gene-LOC132610542, gene-LOC132611375, gene-LOC132611896, gene-LOC132611974, gene-LOC132611976, gene-LOC132612106, gene-LOC132612150, gene-LOC132612244, gene-LOC132612617, gene-LOC132612812, gene-LOC132612904, gene-LOC132613263, gene-LOC132613270, gene-LOC132613271, gene-LOC132613343, gene-LOC132617140, gene-LOC132617789, gene-LOC132618233, gene-LOC132621853, gene-LOC132622253, gene-LOC132624027, gene-LOC132624140, gene-LOC132624299, gene-LOC132624752, gene-LOC132626820, gene-LOC132628619, gene-LOC132629053, gene-LOC132630863, gene-LOC132630934, gene-LOC132631088, gene-LOC132633868, gene-LOC132636148, gene-LOC132636223, gene-LOC132636493, gene-LOC132636727, gene-LOC132637544, gene-LOC132638416, gene-LOC132639278, gene-LOC132639758, gene-LOC132642409, gene-LOC132642500, gene-LOC132643665, gene-LOC132643847, gene-LOC132644038
Solanaceae	Solanum pennellii	3	gene-LOC107009182, gene-LOC107016531, gene-LOC114076118