Basic Information
Locus ID:
gene-LOC132611622
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 10313813 | 10315288 | - | gene-LOC132611622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 50,243.61 Da | 40.75 | 84.32 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 59 | 2.2E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 58 | 7.72E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 57 | 7.7E-6 | - |
| SMART | SM00256 | fbox_2 | 22 | 62 | 9.2E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 117 | 347 | 6.2E-17 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 62 | 8.914593 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047259853.1 | uncharacterized protein LOC124892674, partial [Capsicum annuum] | 0 |
| TrEMBL | A0A2G3AR84 | F-box domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_34332 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg27685 |
| Solanaceae | Lycium barbarum | 7 | gene-LOC132611547, gene-LOC132611549, gene-LOC132611550 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI002051000, SOLCI002051100, SOLCI002060600 |