halophFGD

Basic Information

Locus ID: gene-LOC132611587

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: CWF19-like protein 2

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	6894998	6899716	+	gene-LOC132611587

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.88	33,159.50 Da	50.56	78.52	-0.59

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05699	hAT family C-terminal dimerisation region	163	244	1.0E-24	IPR008906
SUPERFAMILY	SSF53098	Ribonuclease H-like	174	249	3.26E-21	IPR012337
Coils	Coil	Coil	95	115	-	-

Gene Ontology

Molecular Function:

GO:0046983 (protein dimerization activity)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G56290.1	CwfJ-like family protein.	0
RefSeq	XP_019232874.1	PREDICTED: CWF19-like protein 2 [Nicotiana attenuata]	0
Swiss-Prot	P03010	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	0
TrEMBL	A0A1J6KGG9	Zinc finger ccch domain-containing protein 59 OS=Nicotiana attenuata OX=49451 GN=A4A49_21117 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	15	gene_17537, gene_17538, gene_18174, gene_18175, gene_18176 ... gene_18177, gene_18178, gene_3638, gene_3639, gene_3640, gene_3641, gene_3642, gene_5900, gene_5903, gene_5906
Amaranthaceae	Atriplex hortensis	2	Ah014614, Ah014657
Amaranthaceae	Beta vulgaris	1	BVRB_1g002990
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg28880
Amaranthaceae	Salicornia europaea	2	Seu_jg6462, Seu_jg6840
Amaranthaceae	Suaeda glauca	3	Sgl02564, Sgl07719, Sgl29549
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000004485, gene:ENSEOMG00000007793 ... gene:ENSEOMG00000015554, gene:ENSEOMG00000017390, gene:ENSEOMG00000027752
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.2AG0005320, CQ.Regalona.r1.8BG0004300 ... CQ.Regalona.r1.8BG0004320, CQ.Regalona.r1.9AG0000410, CQ.Regalona.r1.9AG0005610
Anacardiaceae	Pistacia vera	1	pistato.v30285400
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000016l.284
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-18723
Solanaceae	Lycium barbarum	1	gene-LOC132611587