Basic Information
Locus ID:
gene-LOC132611567
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 5467576 | 5468919 | - | gene-LOC132611567 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 51,690.81 Da | 43.19 | 107.05 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 36 | 3.2E-5 | IPR001810 |
| Pfam | PF07723 | Leucine Rich Repeat | 234 | 258 | 0.65 | IPR013101 |
| Pfam | PF07723 | Leucine Rich Repeat | 146 | 170 | 0.063 | IPR013101 |
| SUPERFAMILY | SSF52047 | RNI-like | 111 | 294 | 4.71E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 52 | 2.22E-6 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 100 | 397 | 1.0E-10 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59170.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_049407121.1 | probable F-box protein At1g60180 [Solanum stenotomum] | 0 |
| Q9LX54 | Putative F-box/LRR-repeat protein At3g59170 OS=Arabidopsis thaliana OX=3702 GN=At3g59170 PE=4 SV=1 | 0 | |
| TrEMBL | M1A674 | F-box family protein OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology