HalophFGD

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Basic Information
Locus ID: gene-LOC132611550
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 4855988 4856866 - gene-LOC132611550
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.15 33,966.93 Da 42.72 89.42 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 108 235 1.1E-8 IPR013187
SUPERFAMILY SSF50965 Galactose oxidase, central domain 12 247 2.88E-5 IPR011043
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 15 225 6.3E-19 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019224536.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana attenuata] 0
TrEMBL A0A314KVP0 F-boxkelch-repeat protein OS=Nicotiana attenuata OX=49451 GN=A4A49_06855 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg27685
Solanaceae Lycium barbarum 7 gene-LOC132611547, gene-LOC132611549, gene-LOC132611550 ...
gene-LOC132611622, gene-LOC132628836, gene-LOC132637219, gene-LOC132638022
Solanaceae Solanum chilense 3 SOLCI002051000, SOLCI002051100, SOLCI002060600
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.