Basic Information
Locus ID:
gene-LOC132610829
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 28401328 | 28412806 | + | gene-LOC132610829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 37,247.56 Da | 36.34 | 90.99 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 27 | 335 | 1.3E-77 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 23 | 339 | 5.76E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 15 | 335 | 2.3E-102 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 296 | 342 | 0.18 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 4 | 210 | 1.2E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 14 | 336 | 47.596684 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_006349705.1 | PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Solanum tuberosum] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | M1BP81 | Homocysteine s-methyltransferase OS=Solanum tuberosum OX=4113 GN=102595885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology