Basic Information
Locus ID:
gene-LOC132610814
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 28267054 | 28273135 | - | gene-LOC132610814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 68,644.01 Da | 55.84 | 78.20 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 8.21983E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 1.2E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 306 | 1.62E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 272 | 2.5E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 2.8E-22 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 1.8E-79 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 44.611862 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 421 | - | - |
| Coils | Coil | Coil | 607 | 612 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_016565416.1 | serine/threonine-protein kinase Nek2 [Capsicum annuum] | 0 |
| A2ZMH2 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2G3CUN2 | Serine/threonine-protein kinase Nek2 OS=Capsicum chinense OX=80379 GN=BC332_07538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology