Basic Information
Locus ID:
gene-LOC132610589
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 12136112 | 12137500 | - | gene-LOC132610589 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 44,172.29 Da | 35.68 | 92.91 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 52 | 1.5E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 306 | 1.57E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 54 | 1.2E-6 | - |
| SMART | SM00256 | fbox_2 | 15 | 54 | 2.5E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 124 | 313 | 4.9E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10340.1 | F-box family protein. | 0 |
| RefSeq | XP_016567946.1 | F-box/kelch-repeat protein At3g23880 [Capsicum annuum] | 0 |
| Q9LX89 | F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G2X4T5 | F-box domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_06891 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1487 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132610589, gene-LOC132611646, gene-LOC132611647 ... |
| Solanaceae | Solanum chilense | 5 | SOLCI002731400, SOLCI002982900, SOLCI003874500 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107009918, gene-LOC107009922, gene-LOC107009962 ... |