Basic Information
Locus ID:
gene-LOC132610387
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 24000578 | 24004501 | + | gene-LOC132610387 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 110,959.21 Da | 32.22 | 101.21 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 75 | 2.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 535 | 594 | 3.0E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 713 | 985 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 710 | 989 | 1.16E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 312 | 8.73E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 262 | 599 | 1.02E-68 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 195 | 9.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 273 | 337 | 1.0E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 1012 | 9.2E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 634 | 5.7E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 272 | 5.5E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 711 | 795 | 7.5E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 711 | 988 | 6.2E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 461 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 580 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 995 | 38.901726 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 717 | 741 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1024 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_016541906.1 | MDIS1-interacting receptor like kinase 1 [Capsicum annuum] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2VY53 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Capsicum baccatum OX=33114 GN=CQW23_21462 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology