Basic Information
Locus ID:
gene-LOC132610076
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 21971448 | 21973143 | - | gene-LOC132610076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 28,664.33 Da | 51.33 | 72.83 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 213 | 250 | 1.17761E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 210 | 254 | 1.3E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 212 | 257 | 6.19E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 207 | 260 | 2.5E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 213 | 250 | 7.7E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 213 | 251 | 10.822189 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 93 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_033515464.1 | E3 ubiquitin-protein ligase BRE1 [Nicotiana tomentosiformis] | 0 |
| TrEMBL | A0A1S3ZLJ9 | uncharacterized protein LOC107788255 OS=Nicotiana tabacum OX=4097 GN=LOC107788255 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology