Basic Information
Locus ID:
gene-LOC132610009
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 13834788 | 13839926 | + | gene-LOC132610009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 44,356.12 Da | 28.42 | 80.66 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 94 | 365 | 2.10546E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 91 | 365 | 5.6E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 365 | 2.05E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 169 | 1.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 193 | 376 | 5.8E-61 | - |
| SMART | SM00220 | serkin_6 | 88 | 368 | 8.7E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 368 | 40.329262 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 188 | 201 | 6.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 292 | 314 | 6.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 226 | 244 | 6.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 336 | 358 | 6.4E-16 | IPR001245 |
| Coils | Coil | Coil | 4 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009802442.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana sylvestris] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YH29 | serine/threonine-protein kinase HT1-like OS=Nicotiana sylvestris OX=4096 GN=LOC104247973 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology