Basic Information
Locus ID:
gene-LOC132609732
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 121268818 | 121271220 | + | gene-LOC132609732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 71,085.33 Da | 50.15 | 70.98 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 471 | 547 | 1.17184E-44 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 478 | 523 | 2.1E-9 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 77 | 260 | 1.3E-52 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 477 | 547 | 3.01E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 466 | 553 | 4.9E-18 | IPR036638 |
| SMART | SM00353 | finulus | 480 | 529 | 5.3E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 474 | 523 | 16.39922 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 438 | - | - |
| Coils | Coil | Coil | 520 | 554 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_019254152.1 | PREDICTED: transcription factor MYC2-like [Nicotiana attenuata] | 0 |
| A0A060KY90 | Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1 | 0 | |
| TrEMBL | R4S7B4 | transcription factor MYC2 OS=Nicotiana attenuata OX=49451 GN=MYC2_1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology