Basic Information
Locus ID:
gene-LOC132609541
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 115299825 | 115307917 | - | gene-LOC132609541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 87,777.90 Da | 50.11 | 78.67 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 481 | 741 | 2.72215E-89 | - |
| CDD | cd01989 | STK_N | 19 | 169 | 6.0308E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 18 | 156 | 6.7E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 476 | 727 | 2.4E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 167 | 1.0E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 458 | 734 | 2.02E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 547 | 1.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 548 | 757 | 3.5E-51 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 167 | 2.8E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 475 | 735 | 6.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 741 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 593 | 605 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 789 | - | - |
| Coils | Coil | Coil | 387 | 430 | - | - |
| Coils | Coil | Coil | 433 | 453 | - | - |
| Coils | Coil | Coil | 341 | 368 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019260230.1 | PREDICTED: U-box domain-containing protein 52-like isoform X2 [Nicotiana attenuata] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S3ZQ32 | U-box domain-containing protein 52-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107789196 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology