Basic Information
Locus ID:
gene-LOC132609280
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 106565425 | 106573443 | + | gene-LOC132609280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 128,331.77 Da | 43.37 | 78.72 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 595 | 941 | 4.66319E-110 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 600 | 932 | 3.4E-16 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 237 | 575 | 8.55E-23 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 572 | 964 | 1.58E-59 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 574 | 973 | 2.3E-102 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 159 | 438 | 1.7E-10 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 439 | 573 | 2.2E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 226 | 264 | 13.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 451 | 489 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 491 | 528 | 5.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 274 | 312 | 0.36 | IPR001680 |
| SMART | SM00128 | i5p_5 | 593 | 947 | 1.2E-85 | IPR000300 |
| SMART | SM00320 | WD40_4 | 530 | 567 | 110.0 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 971 | 1130 | 8.679933 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1112 | 1159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1113 | 1135 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_019258241.1 | PREDICTED: type I inositol polyphosphate 5-phosphatase 12-like [Nicotiana attenuata] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A314LGG8 | Type i inositol polyphosphate 5-phosphatase 12 OS=Nicotiana attenuata OX=49451 GN=IP5P12_2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology