Basic Information
Locus ID:
gene-LOC132609016
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 82490532 | 82496690 | + | gene-LOC132609016 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 72,644.75 Da | 60.71 | 88.48 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 542 | 627 | 5.2E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 381 | 531 | 5.8E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 74 | 2.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 628 | 1.59E-44 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 203 | 1.8E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 209 | 1.5E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 536 | 2.2E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 537 | 634 | 2.8E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 353 | 460 | 8.4E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 378 | 632 | 19.340271 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 248 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_016575553.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X1 [Capsicum annuum] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8H3B1 | Inactive receptor-like serine/threonine-protein kinase OS=Capsicum annuum OX=4072 GN=T459_16376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology