Basic Information
Locus ID:
gene-LOC132608273
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 171162858 | 171166781 | + | gene-LOC132608273 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 49,032.97 Da | 40.44 | 93.47 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 119 | 325 | 2.5E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 402 | 6.61E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 196 | 399 | 1.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 193 | 3.8E-24 | - |
| SMART | SM00220 | serkin_6 | 119 | 359 | 8.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 119 | 391 | 35.113815 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 125 | 147 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35960.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_019231404.1 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Nicotiana attenuata] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4CM30 | receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Nicotiana tabacum OX=4097 GN=LOC107820418 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology