Basic Information
Locus ID:
gene-LOC132608230
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 119807723 | 119808340 | - | gene-LOC132608230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 22,967.03 Da | 30.43 | 75.17 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 135 | 201 | 3.2E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 199 | 1.83E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 205 | 2.2E-41 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 205 | 19.665354 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 22 | 34 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22840.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004249591.1 | SRSF protein kinase 2-like [Solanum lycopersicum] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | M1AFG6 | Srpk OS=Solanum tuberosum OX=4113 GN=102588730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030802 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005656 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0094600.1 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1477 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606946, gene-LOC132608230 |