halophFGD

Basic Information

Locus ID: gene-LOC132608193

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Belongs to the sterol desaturase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	116716794	116718828	-	gene-LOC132608193

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.24	38,281.46 Da	54.26	85.94	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF57997	Tropomyosin	186	341	6.28E-8	-
MobiDBLite	mobidb-lite	consensus disorder prediction	28	94	-	-
Coils	Coil	Coil	227	261	-	-
Coils	Coil	Coil	290	310	-	-
Coils	Coil	Coil	192	219	-	-

KEGG Pathway

KO Term:

K15404 (aldehyde decarbonylase [EC:4.1.99.5])

Pathway:

ko00073 (Cutin, suberine and wax biosynthesis) map00073 (Cutin, suberine and wax biosynthesis) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R09466 (Long-chain aldehyde <=> Alkane + CO)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_033510299.1	uncharacterized protein LOC117275056 [Nicotiana tomentosiformis]	0
TrEMBL	M1DUQ4	Integrase catalytic domain-containing protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	13	gene-LOC132601702, gene-LOC132608193, gene-LOC132609001 ... gene-LOC132611816, gene-LOC132612961, gene-LOC132613274, gene-LOC132617650, gene-LOC132619768, gene-LOC132624578, gene-LOC132624700, gene-LOC132632155, gene-LOC132636787, gene-LOC132637708