Basic Information
Locus ID:
gene-LOC132607741
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 19483797 | 19486488 | + | gene-LOC132607741 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 38,640.44 Da | 56.92 | 73.53 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 118 | 249 | 1.8E-26 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 34 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049358914.1 | uncharacterized protein LOC125823614 [Solanum verrucosum] | 0 |
| TrEMBL | A0A1J6J9R2 | BED-type domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_51032 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 52 | gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107009182, gene-LOC107016531, gene-LOC114076118 |