Basic Information
Locus ID:
gene-LOC132607484
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 131192656 | 131197551 | + | gene-LOC132607484 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 42,792.67 Da | 39.18 | 99.03 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 60 | 324 | 2.6E-88 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 64 | 323 | 1.4E-40 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 87 | 387 | 6.6E-92 | IPR027417 |
| SMART | SM00382 | AAA_5 | 110 | 271 | 2.8E-5 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 56 | 379 | 1.2E-100 | IPR013765 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 253 | 329 | 17.117178 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 88 | 247 | 30.441919 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 300 | 329 | 7.6E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 218 | 247 | 7.6E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 353 | 370 | 7.6E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 146 | 175 | 7.6E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 267 | 295 | 7.6E-58 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 180 | 209 | 7.6E-58 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_049402667.1 | DNA repair protein recA homolog 2, mitochondrial [Solanum stenotomum] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G3BHD2 | DNA repair protein recA-like protein 2, mitochondrial OS=Capsicum chinense OX=80379 GN=BC332_26716 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology