Basic Information
Locus ID:
gene-LOC132607367
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 129026157 | 129027537 | - | gene-LOC132607367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 38,349.03 Da | 39.21 | 67.02 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 11 | 53 | 1.4E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 157 | 203 | 1.7E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 116 | 155 | 2.0E-9 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 52 | 3.14E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 298 | 1.57E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 47 | 300 | 1.6E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 120 | 168 | 2.4E-10 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.4E-5 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 2.6E-4 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_049376049.1 | F-box/kelch-repeat protein At1g15670-like [Solanum verrucosum] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0V0I565 | Putative F-box/kelch-repeat protein-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology