Basic Information
Locus ID:
gene-LOC132607272
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 127507619 | 127512355 | - | gene-LOC132607272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 30,650.79 Da | 20.93 | 75.98 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 139 | 236 | 1.64948E-40 | - |
| CDD | cd04216 | Phytocyanin | 24 | 122 | 3.67508E-39 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 112 | 5.1E-24 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 148 | 226 | 3.2E-25 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 22 | 122 | 1.96E-31 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 137 | 236 | 9.37E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 127 | 1.5E-33 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 136 | 241 | 3.0E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 124 | 39.127403 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 138 | 238 | 38.807312 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_009790019.1 | PREDICTED: blue copper protein-like [Nicotiana sylvestris] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U7XT04 | blue copper protein-like OS=Nicotiana sylvestris OX=4096 GN=LOC104237548 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology