Basic Information
Locus ID:
gene-LOC132607164
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 125118737 | 125151515 | + | gene-LOC132607164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 87,934.83 Da | 50.47 | 87.35 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 527 | 775 | 5.05107E-128 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 138 | 343 | 5.8E-75 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 522 | 775 | 1.3E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 505 | 775 | 1.48E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 514 | 599 | 1.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 783 | 2.7E-62 | - |
| SMART | SM00220 | serkin_6 | 521 | 779 | 4.7E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 521 | 779 | 45.615379 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 527 | 548 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 642 | 654 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 636 | 654 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 746 | 768 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 683 | 693 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 702 | 724 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 595 | 608 | 1.0E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 428 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_049400879.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Solanum stenotomum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8E8C5 | serine/threonine-protein kinase CTR1-like isoform X2 OS=Capsicum annuum OX=4072 GN=LOC107843641 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology