Basic Information
Locus ID:
gene-LOC132607134
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 124486203 | 124496331 | - | gene-LOC132607134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 33,156.52 Da | 54.84 | 53.84 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14599 | Zinc-ribbon | 214 | 271 | 1.0E-25 | IPR039512 |
| Pfam | PF13639 | Ring finger domain | 165 | 208 | 5.1E-8 | IPR001841 |
| Pfam | PF05495 | CHY zinc finger | 30 | 111 | 2.1E-18 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 26 | 101 | 1.44E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 165 | 215 | 8.35E-11 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 102 | 159 | 2.09E-17 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 158 | 229 | 1.2E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 237 | 278 | 5.7E-20 | - |
| SMART | SM00184 | ring_2 | 166 | 208 | 9.7E-8 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 101 | 165 | 31.488531 | IPR017921 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 166 | 209 | 12.002429 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 23 | 99 | 25.102921 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_009775005.1 | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like isoform X1 [Nicotiana sylvestris] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7WCP9 | RING finger and CHY zinc finger domain-containing protein 1-like isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104224967 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology