Basic Information
Locus ID:
gene-LOC132607100
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 123654236 | 123657123 | - | gene-LOC132607100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 77,346.23 Da | 37.10 | 87.76 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 46 | 258 | 1.2731E-63 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 387 | 656 | 1.75265E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 382 | 652 | 6.8E-52 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 262 | 7.6E-53 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 272 | 1.91E-57 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 688 | 5.06E-82 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 27 | 267 | 1.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 456 | 2.9E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 675 | 1.9E-63 | - |
| SMART | SM00220 | serkin_6 | 381 | 654 | 1.2E-39 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 663 | 39.255077 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 387 | 410 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 141 | 147 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 500 | 512 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 303 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_016543359.1 | L-type lectin-domain containing receptor kinase VIII.1 [Capsicum annuum] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G3BG36 | L-type lectin-domain containing receptor kinase VIII.2 OS=Capsicum chinense OX=80379 GN=BC332_26277 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology