Basic Information
Locus ID:
gene-LOC132606946
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 120002598 | 120041286 | - | gene-LOC132606946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 42,967.05 Da | 24.74 | 86.08 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 53 | 360 | 2.14727E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 48 | 168 | 6.8E-13 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 269 | 354 | 3.1E-12 | IPR000719 |
| Pfam | PF16113 | Enoyl-CoA hydratase/isomerase | 12 | 53 | 2.0E-11 | IPR045004 |
| SUPERFAMILY | SSF52096 | ClpP/crotonase | 9 | 55 | 8.71E-5 | IPR029045 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 370 | 2.13E-53 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 113 | 3.3E-77 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 357 | 3.3E-77 | - |
| SMART | SM00220 | serkin_6 | 26 | 378 | 8.5E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 385 | 21.48864 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22840.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004249591.1 | SRSF protein kinase 2-like [Solanum lycopersicum] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CEN4 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_017156 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030802 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005656 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0094600.1 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1477 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606946, gene-LOC132608230 |