Basic Information
Locus ID:
gene-LOC132606717
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 111529712 | 111541688 | - | gene-LOC132606717 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 85,211.52 Da | 43.85 | 94.61 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 453 | 717 | 6.01993E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 450 | 714 | 1.1E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 746 | 4.72E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 184 | 2.44E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 523 | 727 | 2.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 59 | 9.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 109 | 256 | 6.5E-10 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 522 | 7.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 108 | 2.6E-9 | IPR032675 |
| SMART | SM00220 | serkin_6 | 447 | 720 | 3.6E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 447 | 720 | 39.594292 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 567 | 579 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 453 | 475 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 92 | 105 | 7.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 136 | 149 | 7.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37450.4 | - | 0 |
| RefSeq | XP_049402702.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Solanum stenotomum] | 0 |
| C0LGU1 | Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana OX=3702 GN=At5g37450 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BLT0 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_008555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology