Basic Information
Locus ID:
gene-LOC132606715
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 111487291 | 111512489 | - | gene-LOC132606715 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 105,874.11 Da | 40.48 | 93.56 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 1.3404E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 3.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 887 | 2.3E-51 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 913 | 4.65E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 384 | 1.48E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 288 | 9.7E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 445 | 2.3E-9 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 693 | 1.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 913 | 5.1E-59 | - |
| SMART | SM00220 | serkin_6 | 618 | 890 | 1.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 894 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_047254137.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X4 [Capsicum annuum] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G2VT32 | Putative LRR receptor-like serine/threonine-protein kinase OS=Capsicum baccatum OX=33114 GN=CQW23_23850 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology