Basic Information
Locus ID:
gene-LOC132606669
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Hippocampus abundant
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 110140149 | 110152688 | + | gene-LOC132606669 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 47,902.98 Da | 44.15 | 115.50 | 0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 426 | 2.78798E-41 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 386 | 4.1E-18 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 426 | 2.09E-30 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 426 | 2.8E-32 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_009775454.1 | PREDICTED: hippocampus abundant transcript 1 protein-like [Nicotiana sylvestris] | 0 |
| A4IF94 | Hippocampus abundant transcript-like protein 1 OS=Bos taurus OX=9913 GN=MFSD14B PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8EH54 | hippocampus abundant transcript-like protein 1 isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107845752 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology