Basic Information
Locus ID:
gene-LOC132606404
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
SERK5
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 98887733 | 98896339 | + | gene-LOC132606404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 68,157.75 Da | 41.03 | 95.92 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 1.3E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 293 | 563 | 8.7E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 94 | 116 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 204 | 1.98E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 270 | 566 | 5.19E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 205 | 1.8E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 585 | 1.0E-71 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 260 | 367 | 6.3E-40 | - |
| SMART | SM00220 | serkin_6 | 291 | 565 | 1.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 291 | 578 | 37.233917 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 297 | 319 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 414 | 426 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 216 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33430.1 | BRI1-associated receptor kinase. Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. | 0 |
| RefSeq | NP_001234626.1 | somatic embryogenesis receptor kinase 3A precursor [Solanum lycopersicum] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 | |
| TrEMBL | G0XZA5 | Somatic embryogenesis receptor kinase 3A OS=Solanum lycopersicum OX=4081 GN=SERK3A PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology