Basic Information
Locus ID:
gene-LOC132606287
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 90397846 | 90411443 | - | gene-LOC132606287 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 143,279.77 Da | 44.26 | 71.79 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1022 | 1275 | 7.63741E-107 | - |
| CDD | cd06410 | PB1_UP2 | 187 | 282 | 3.31489E-48 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1017 | 1279 | 2.1E-60 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 200 | 283 | 1.6E-20 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 199 | 287 | 1.28E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1005 | 1278 | 6.83E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1104 | 1301 | 2.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1009 | 1103 | 9.2E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 202 | 284 | 2.7E-9 | - |
| SMART | SM00666 | PB1_new | 198 | 284 | 3.4E-30 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1016 | 1282 | 9.6E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1016 | 1296 | 40.993561 | IPR000719 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 198 | 284 | 11.394243 | IPR000270 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1141 | 1153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1022 | 1047 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1206 | 1228 | 2.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1135 | 1153 | 2.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1098 | 1111 | 2.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1250 | 1272 | 2.3E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 160 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_049369630.1 | uncharacterized protein LOC125834548 isoform X2 [Solanum verrucosum] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IZR8 | Putative serine/threonine-protein kinase pakA-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology