Basic Information
Locus ID:
gene-LOC132605633
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1568449 | 1576506 | - | gene-LOC132605633 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 44,982.67 Da | 42.59 | 79.04 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 365 | 2.6E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 367 | 1.11E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 176 | 1.6E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 379 | 8.6E-21 | - |
| SMART | SM00219 | tyrkin_6 | 97 | 365 | 0.0022 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 369 | 17.050564 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42440.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019231037.1 | PREDICTED: wall-associated receptor kinase-like 1 isoform X1 [Nicotiana attenuata] | 0 |
| TrEMBL | M1AFK3 | LRR receptor-like serine/threonine-protein kinase OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132601764, gene-LOC132602047, gene-LOC132602771 ... |