Basic Information
Locus ID:
gene-LOC132604933
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2705233 | 2707038 | - | gene-LOC132604933 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.43 | 23,895.71 Da | 67.16 | 51.64 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 171 | 208 | 2.08557E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 169 | 212 | 7.3E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 170 | 215 | 4.64E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 219 | 2.3E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 171 | 208 | 6.4E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 171 | 209 | 10.556635 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_016456250.1 | PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Nicotiana tabacum] | 0 |
| TrEMBL | A0A1S3YW50 | LON peptidase N-terminal domain and RING finger protein 3-like OS=Nicotiana tabacum OX=4097 GN=LOC107780230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology