Basic Information
Locus ID:
gene-LOC132604532
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Ulp1 protease family, C-terminal catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 132616130 | 132622393 | - | gene-LOC132604532 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 64,947.41 Da | 43.15 | 77.87 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 367 | 548 | 1.6E-42 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 321 | 553 | 5.49E-68 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 310 | 553 | 2.5E-76 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 353 | 525 | 27.122408 | IPR003653 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15880.1 | Cysteine proteinases superfamily protein. EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. | 0 |
| RefSeq | XP_049399089.1 | ubiquitin-like-specific protease ESD4 [Solanum stenotomum] | 0 |
| Q94F30 | Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana OX=3702 GN=ESD4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IDM9 | Putative ubiquitin-like-specific protease ESD4-like OS=Solanum chacoense OX=4108 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12418, jg28038 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18789 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah020904 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59915, Sbi_jg62852 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg24000 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00027803 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl03394, Sgl08511 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015734, gene:ENSEOMG00000029214 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0016070, CQ.Regalona.r1.3BG0016930 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30234380 |
| Apiaceae | Apium graveolens | 2 | Ag1G01965, Ag5G02415 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G001850, COCNU_04G009910, scaffold072761G000010 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103715291, gene-LOC103723468, gene-LOC120108284 ... |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.2122.V1.1, AsparagusV1_05.939.V1.1 ... |
| Asteraceae | Flaveria trinervia | 3 | Ftri13G26646, Ftri14G07701, Ftri3G30311 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT3G06910.1, AT4G00690.1, AT4G15880.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10005561m.g.v1.0, Thhalv10020659m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp3g05860.v2.2, Sp7g06040.v2.2, Sp7g14290.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g031520.2N, BniB01g056890.2N, BniB02g073660.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq09G1139, Ceq09G1160 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1237 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g06160 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0260s00004.v1.0, Dusal.0591s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g08840 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4157 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1303 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011094, Pov_00019227 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G37588, Lb5G27282, Lb5G29146 |
| Poaceae | Echinochloa crus-galli | 9 | AH01.3670, AH02.1647, AH03.4032, BH01.4022, BH02.1674 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0016400, gene-QOZ80_1BG0065300 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0113550.1, HORVU.MOREX.r3.3HG0260990.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_014937, gene-QYE76_038833, gene-QYE76_052925 ... |
| Poaceae | Oryza coarctata | 5 | Oco01G010020, Oco02G010420, Oco05G013290, Oco06G013130 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os01g25370.1, LOC_Os03g22400.1, LOC_Os03g29630.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G357800, gene-BS78_02G386400 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0102705, Pt_Chr0305204, Pt_Chr0305247, Pt_Chr0603555 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr04G011250, Chr05G013930, Chr07G010610, Chr08G008020 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G242600, Tel3E01G338800, Tel4E01G252300 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG013650, gene_TRIDC2BG016480 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS2A02G112900.2, TraesCS2B02G131700.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb016540_P004, Zm00001eb111330_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-1597, nbis-gene-36632 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g1218, Zma_g26618, Zma_g5765, Zma_g7947 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG16.1502, evm.TU.LG26.164 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g11630 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.582, evm.TU.Scaffold_6_RagTag.603 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-1384, nbisL1-mrna-16087 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15893, nbisL1-mrna-21341 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-495, nbisL1-mrna-6294 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.348, evm.TU.utg000019l.862 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007212, Maker00012691 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12199, nbisL1-mrna-13729 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18185, nbisL1-mrna-3640 |
| Salicaceae | Populus euphratica | 4 | populus_peu08052, populus_peu19229, populus_peu22212 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132604532, gene-LOC132626795 |
| Solanaceae | Solanum chilense | 2 | SOLCI002390400, SOLCI005286800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005305, gene-LOC107009948 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9425 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1629 |
| Zosteraceae | Zostera marina | 2 | Zosma02g02970.v3.1, Zosma02g18390.v3.1 |