Basic Information
Locus ID:
gene-LOC132604288
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Zc3h12a-like Ribonuclease NYN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 164234682 | 164241430 | - | gene-LOC132604288 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 63,787.74 Da | 40.64 | 80.44 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 261 | 496 | 3.6E-59 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 14 | 218 | 1.6E-67 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 22 | 497 | 1.1E-208 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 277 | 462 | 1.1E-208 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 566 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_019247886.1 | PREDICTED: proteinaceous RNase P 2 [Nicotiana attenuata] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IG50 | ribonuclease P OS=Solanum chacoense OX=4108 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology