Basic Information
Locus ID:
gene-LOC132604118
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 123306266 | 123308256 | - | gene-LOC132604118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 67,571.27 Da | 39.88 | 92.14 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 180 | 224 | 7.09502E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 186 | 225 | 9.4E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 351 | 587 | 2.4E-41 | IPR001245 |
| SUPERFAMILY | SSF54106 | LysM domain | 179 | 225 | 4.71E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 589 | 1.19E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 292 | 391 | 3.3E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 603 | 2.0E-53 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 167 | 240 | 2.3E-7 | IPR036779 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 179 | 224 | 9.643729 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 264 | 598 | 31.650986 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_049355747.1 | protein LYK5-like [Solanum verrucosum] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G2Y9S9 | protein LYK5-like OS=Capsicum annuum OX=4072 GN=LOC107850445 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology